PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13896.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family bHLH
Protein Properties Length: 255aa    MW: 28587.1 Da    PI: 8.2543
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.4e-09139186455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++iN+++  L++++P +     k +  a +L + ++Y++sLq
  PIN13896.1 139 SHSLAERVRREKINEKLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 186
                 8*************************9....35599999**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MADHNFLQSF SLSDNDPNIG FINHISGINP SDNMMEFPPD NPFPLESSGL FIHQNNNSAI  60
VPSSNQHMII SNDNDHLNLK RKAKEISASN SSPQGSHNGI TRKYSARKGK KVKGNEKKEG  120
KQPREVVHVR AKRGQATDSH SLAERVRREK INEKLRCLQD IVPGCYKTMG MAVMLDEIIN  180
YVQSLQNQVE FLSMKLTAAS SFYDFNSETA ALETIQREKA LEALKIENGT NSLPPPHFPP  240
SDLNFGYDPQ LPQNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.16e-59bHLH family protein