PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN13357.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB_related
Protein Properties Length: 339aa    MW: 36582.5 Da    PI: 7.3937
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN13357.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.61e-11103147347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+  ++ + ++lG+g+W+ Iar     Rt+ q+ s+ qky
       PIN13357.1 103 PWTEDEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKY 147
                      8*****************************89************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL IDGSIRKSAS MGNLSHYMGG GGGGGSGSGT  60
PQNGAVHGDS PTDTPGHPSA DGYASEDFVA GSSSSRERKK GVPWTEDEHR MFLLGLQKLG  120
KGDWRGIARN YVISRTPTQV ASHAQKYFIR QSNVSRRKRR SSLFDIVADE SVDDAPAGSR  180
DFFPVNPPQP ETQSSTPMPP PSVDEECESM ESANSNDGEP MLPKSEGAQY PYPVVYPAYV  240
APFFPLSIPY WPGYNAEPVK EETHQVVKPT AVRSTNPINV DELVGMSKLS LGESIRDSAP  300
STLSLKLVEG SSTRPSAFHA NQTSGNPDMN SSHNQIHAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-120MYB_related family protein