PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13341.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB_related

Protein Properties

Length: 721aa MW: 78404.1 Da PI: 6.8933

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13341.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.3e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ PIN13341.1 24 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 721 aa Download sequence
MDPYSSGEDL VIKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFT KLEKEAVVKG VPVGHALDIE IPPPRPKRKP NNPYPRKTTV VTPSQVGVKD 120 GKISNPASSS CQSKRTVALE KETEKLCDDG KLGSSKGYHE KDNCSEASTL LKTAPCAFPS 180 SANETSLAVS DAPKRSRTSG QYVPHSKEAS DQGGTAASQV TIEAKGLQME KSDNKNLFQD 240 NSSFNISNAM DSYLSHEKFV HCKRINELKH SESVDTLSAA DLQASQNYPR HVPVHILDGS 300 LGMNAQNISP DMSYAESMFH QLGGVHGHQN LFMNPAASAT SEHYSDASRS SVHQSFPSYH 360 PIFTPIQNQD DYQSFLHVSS TFSSLIVSAL TQNPAAYAAA SFATTLWPCV NMEAPVEPST 420 ASAGACQSRP VSSTPSMAAI AAATVAAATA WWAAHGLLPL CAPFHPGFTC SPASASETPI 480 EGAKLNVGMA IAETAKVADT ADELHDANKS KNKKQVDRSS CGSNTPSSSE VEADALEKHS 540 KGKEEKNMQD KEEAEELDAV HPVGDPSSRR CRSASNVNDS WKEVSEEGRL AFQALFSREV 600 LPQSFSPPHD LKNKAQKNSN TDKGSAEEKD EDGLQLDLNG KTSGTSSEKQ GVEDITSLIG 660 ENKEEGLLNM GLGHAKLKAR RTGFKPYKRC SMEAKESRLS ANSQDEEKGP KRLRMEGQAS 720 T

Sequence ? help Back to Top

Protein Sequence Length: 721 aa Download sequence

MDPYSSGEDL VIKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFT KLEKEAVVKG VPVGHALDIE IPPPRPKRKP NNPYPRKTTV VTPSQVGVKD  120
GKISNPASSS CQSKRTVALE KETEKLCDDG KLGSSKGYHE KDNCSEASTL LKTAPCAFPS  180
SANETSLAVS DAPKRSRTSG QYVPHSKEAS DQGGTAASQV TIEAKGLQME KSDNKNLFQD  240
NSSFNISNAM DSYLSHEKFV HCKRINELKH SESVDTLSAA DLQASQNYPR HVPVHILDGS  300
LGMNAQNISP DMSYAESMFH QLGGVHGHQN LFMNPAASAT SEHYSDASRS SVHQSFPSYH  360
PIFTPIQNQD DYQSFLHVSS TFSSLIVSAL TQNPAAYAAA SFATTLWPCV NMEAPVEPST  420
ASAGACQSRP VSSTPSMAAI AAATVAAATA WWAAHGLLPL CAPFHPGFTC SPASASETPI  480
EGAKLNVGMA IAETAKVADT ADELHDANKS KNKKQVDRSS CGSNTPSSSE VEADALEKHS  540
KGKEEKNMQD KEEAEELDAV HPVGDPSSRR CRSASNVNDS WKEVSEEGRL AFQALFSREV  600
LPQSFSPPHD LKNKAQKNSN TDKGSAEEKD EDGLQLDLNG KTSGTSSEKQ GVEDITSLIG  660
ENKEEGLLNM GLGHAKLKAR RTGFKPYKRC SMEAKESRLS ANSQDEEKGP KRLRMEGQAS  720
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46830.1	2e-96	MYB_related family protein