PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN13252.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TALE

Protein Properties

Length: 457aa MW: 52254.6 Da PI: 6.6708

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN13252.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.8	1.9e-08	375	413	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + PIN13252.1 375 MFQNflHPYPKDAEKHLLALKSGLTRDQVSNWFVNARVR 413 5887779******************************88 PP
2	BELL	64.7	2e-21	252	321	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 ++e++ kk +Ll ll+ Vd+rY+q+ +++t s+F+a+++l+ +++++Al +iS+ +++L+ +i+++i PIN13252.1 252 EREIEVKKKHLLALLQLVDNRYNQCLAEIHTKTSAFHAITELDR-DLHAKFALPTISFMYKNLRARISSHI 321 689***************************************.*********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MDNFACEEMA NRVTVAGANS NEFCTIEPEG DATGFSTGTL YPQISIVQDT DWIMQRIPLP 60 AERHISSENQ EKLTTSGRFA YPSENTKTAV NNGYESLVFD TSATWDFDKW MMTEERCLNS 120 NSTRSSRSSN GNSFEEQCSE MGSSGMTSCT LLDQHIVSEH ASCSSSNNVS LSFDSYKPFL 180 LPSGSTFVLA MQEILAEIAC YALENTDCMS YSGLNASFSS NSIAAKCHPA IDFSKGVDRD 240 CSFLFHDNVL QEREIEVKKK HLLALLQLVD NRYNQCLAEI HTKTSAFHAI TELDRDLHAK 300 FALPTISFMY KNLRARISSH ILALGSHLKE REVREGKSFD TRFVEKQWAH TRDHQLWKPQ 360 RGLPERSVSV LRAWMFQNFL HPYPKDAEKH LLALKSGLTR DQVSNWFVNA RVRLWKPMIE 420 AMYAEMNTRK TRRNNDEQTE GNRRNQMRFE NTRFTRE

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MDNFACEEMA NRVTVAGANS NEFCTIEPEG DATGFSTGTL YPQISIVQDT DWIMQRIPLP  60
AERHISSENQ EKLTTSGRFA YPSENTKTAV NNGYESLVFD TSATWDFDKW MMTEERCLNS  120
NSTRSSRSSN GNSFEEQCSE MGSSGMTSCT LLDQHIVSEH ASCSSSNNVS LSFDSYKPFL  180
LPSGSTFVLA MQEILAEIAC YALENTDCMS YSGLNASFSS NSIAAKCHPA IDFSKGVDRD  240
CSFLFHDNVL QEREIEVKKK HLLALLQLVD NRYNQCLAEI HTKTSAFHAI TELDRDLHAK  300
FALPTISFMY KNLRARISSH ILALGSHLKE REVREGKSFD TRFVEKQWAH TRDHQLWKPQ  360
RGLPERSVSV LRAWMFQNFL HPYPKDAEKH LLALKSGLTR DQVSNWFVNA RVRLWKPMIE  420
AMYAEMNTRK TRRNNDEQTE GNRRNQMRFE NTRFTRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	2e-84	TALE family protein