PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12897.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

WRKY

Protein Properties

Length: 705aa MW: 78290.1 Da PI: 7.6387

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12897.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.6	2.2e-32	243	299	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDg+ WrKYGqK+vkgsefprsYY+Ct ++Cpvkkkvers+ d++++ei+Y+g+Hnh+ PIN12897.1 243 DDGFYWRKYGQKHVKGSEFPRSYYKCTATNCPVKKKVERSH-DGQITEIVYKGSHNHP 299 8**************************************.*************7 PP
2	WRKY	105.8	2.3e-33	441	499	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+a+d k v++tYeg+Hnhe PIN12897.1 441 LDDGYRWRKYGQKVVKGNPNPRSYYKCTTPGCPVRKHVERAANDIKSVVTTYEGKHNHE 499 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 705 aa Download sequence
MAAIDGGGGR PPFMTNANLT EEEHQLFQND NRKPISIAER RAAKSGFNAS NINAARFKTT 60 TTSWMPQVGL GLGSSCFTIP PGISPSALLD SPVMLPNAQA QQSPTTGTFE FPSPCHDDSL 120 KLKLKHATKP EAQGQGVAHL ENKVLIITSP ANHIYDHIEQ PFEGLEYLQE MSKRDSYFEV 180 DALAKSEDLV QCSTSLQPSI TNNNNNSNSN QILSHNEHIS GRERLISTNS NHQRSKEVAK 240 YSDDGFYWRK YGQKHVKGSE FPRSYYKCTA TNCPVKKKVE RSHDGQITEI VYKGSHNHPV 300 PDQAFKGFSE NAEISEGRPS CFQTNGKAFA LSSGWRADHC LDGTISTSFL SDFSDHPISR 360 PINTYERVEA QFSSPVGRQD CDGRNEASPQ SISLNDEDDE NGESCEPKKR KRDSFPIETI 420 ASRSTREPRV VVQIESKIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTP GCPVRKHVER 480 AANDIKSVVT TYEGKHNHEV PTSKNSSLVI SDVGSLPPAV TNSTLSTRTT MAQQLDVPTP 540 RTGKQVQDLP LYLDRKPMFS FNDMMRSNLP GNFANDVKFG ASSVYPLSFP PFQSLPPYGS 600 RSMSNSHIKN YPSCNLYPML PDYMPLSSQI NHVPGSGSAN VSPTLGGNFH FNTYSVIQTG 660 SSHGREMEIR QHHPKTVKPK EEQRDDGHEL YDNCLSIPIH GNGTI

Sequence ? help Back to Top

Protein Sequence Length: 705 aa Download sequence

MAAIDGGGGR PPFMTNANLT EEEHQLFQND NRKPISIAER RAAKSGFNAS NINAARFKTT  60
TTSWMPQVGL GLGSSCFTIP PGISPSALLD SPVMLPNAQA QQSPTTGTFE FPSPCHDDSL  120
KLKLKHATKP EAQGQGVAHL ENKVLIITSP ANHIYDHIEQ PFEGLEYLQE MSKRDSYFEV  180
DALAKSEDLV QCSTSLQPSI TNNNNNSNSN QILSHNEHIS GRERLISTNS NHQRSKEVAK  240
YSDDGFYWRK YGQKHVKGSE FPRSYYKCTA TNCPVKKKVE RSHDGQITEI VYKGSHNHPV  300
PDQAFKGFSE NAEISEGRPS CFQTNGKAFA LSSGWRADHC LDGTISTSFL SDFSDHPISR  360
PINTYERVEA QFSSPVGRQD CDGRNEASPQ SISLNDEDDE NGESCEPKKR KRDSFPIETI  420
ASRSTREPRV VVQIESKIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTTP GCPVRKHVER  480
AANDIKSVVT TYEGKHNHEV PTSKNSSLVI SDVGSLPPAV TNSTLSTRTT MAQQLDVPTP  540
RTGKQVQDLP LYLDRKPMFS FNDMMRSNLP GNFANDVKFG ASSVYPLSFP PFQSLPPYGS  600
RSMSNSHIKN YPSCNLYPML PDYMPLSSQI NHVPGSGSAN VSPTLGGNFH FNTYSVIQTG  660
SSHGREMEIR QHHPKTVKPK EEQRDDGHEL YDNCLSIPIH GNGTI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-82	WRKY family protein