PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN12306.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 386aa MW: 42206.1 Da PI: 6.2737

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN12306.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.5	1.3e-27	126	180	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH++FveaveqL G +kA+P++ile+m++++Lt+++++SHLQkYR++ PIN12306.1 126 KVKVDWTPELHRKFVEAVEQL-GVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSH 180 5689***************.******************************86 PP
2	Myb_DNA-binding	37.6	5.2e-12	129	178	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ PIN12306.1 129 VDWTPELHRKFVEAVEQLGVDkaVPSRILEIMGiDCLTRHNIASHLQKYR 178 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MLAVSPLRSG KNERENQIQD FSSMEGNEFN LLDSIDFDDI FVGIDDGYFL PDLDMDPEIL 60 AEKLDENGSG ENGEATAASV SGLDTGSGEQ IVNEREESVA VNPSPKEDVK GRKSSGHCKN 120 PSGKKKVKVD WTPELHRKFV EAVEQLGVDK AVPSRILEIM GIDCLTRHNI ASHLQKYRSH 180 RKHLLAREAE AARWSQRRQM YGMAVVAAGK GEVNPWIAPT MGFPPVTSIP HFSPLLHVWG 240 HPPIDQSLMH TWPKQVAPPP LSWPPFPPAH PLPPADPSFW PHCQYVPTPG TPCFAPHLPP 300 TRFPAPPVHG VPPPAVYKVD SAGQTLPQPP SDVQPSKESI DAAIGDVLAK PWLPLPLGLK 360 PPSLDSVMVE LQRQGVSKIP PTNCAK

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MLAVSPLRSG KNERENQIQD FSSMEGNEFN LLDSIDFDDI FVGIDDGYFL PDLDMDPEIL  60
AEKLDENGSG ENGEATAASV SGLDTGSGEQ IVNEREESVA VNPSPKEDVK GRKSSGHCKN  120
PSGKKKVKVD WTPELHRKFV EAVEQLGVDK AVPSRILEIM GIDCLTRHNI ASHLQKYRSH  180
RKHLLAREAE AARWSQRRQM YGMAVVAAGK GEVNPWIAPT MGFPPVTSIP HFSPLLHVWG  240
HPPIDQSLMH TWPKQVAPPP LSWPPFPPAH PLPPADPSFW PHCQYVPTPG TPCFAPHLPP  300
TRFPAPPVHG VPPPAVYKVD SAGQTLPQPP SDVQPSKESI DAAIGDVLAK PWLPLPLGLK  360
PPSLDSVMVE LQRQGVSKIP PTNCAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	6e-76	G2-like family protein