PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN12238.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 211aa MW: 23100 Da PI: 4.9587 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53 | 8.4e-17 | 43 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 y GVr ++ +g+Wv+eIr p r r++lg++ tae+Aa+a++ a+++++g PIN12238.1 43 LYIGVRMRS-WGKWVSEIRQP-----RmkSRIWLGTYSTAEMAARAHDVAALSIKG 92 699***998.**********8.....446**********************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MAAPLPSAAK SPSTTTAAVE SKQNPEKIKS KKRARDIGTK HPLYIGVRMR SWGKWVSEIR 60 QPRMKSRIWL GTYSTAEMAA RAHDVAALSI KGDSAILNFP HLRDSLPRPA SLSPRDVQDA 120 AAKAAAMEEL YLLDSPSCAE AEELGEIIEL PSLEGSHDSS KSGTEFPFVD SEEGWLPPPW 180 WAVDTDFFGD YFSDVMAGGG SGFESMQLWD N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11590.1 | 5e-47 | ERF family protein |