PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11925.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HSF
Protein Properties Length: 330aa    MW: 37553.9 Da    PI: 5.0546
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11925.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.21.7e-35261162101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++d++++++isw+ +g++f+v++++efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ F++g+k+ll +i+
    PIN11925.1  26 FLTKTYQLVDDQAIDDVISWNVDGSTFIVWNPTEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNECFRRGEKRLLFYIQ 113
                   9*****************************************************************99.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
    PIN11925.1 114 RRK 116
                   *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MALPSADHSG GESTAGDTAR LIPTPFLTKT YQLVDDQAID DVISWNVDGS TFIVWNPTEF  60
ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVV PDRWEFSNEC FRRGEKRLLF YIQRRKIATR  120
SPTTTVTPPV KETFQPTPPV PPRTVSPSDS GEEQVLSSSI SPPAVREFSG STTELIGENE  180
RLKKENVQLN KELCHMKNLY NNIYFLMSNY ASSNNDDRSN GCQEHSCKSY LTETAVKPLD  240
LLPMTRFYKQ IEIGEENNMR STAEEIGARL FGVPIGAKRG REGEEDEMEL QLQQPGDTAK  300
SEPFDQDDRG DNQEPSWLLR TSSRNRMVCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.16e-80HSF family protein