PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN11738.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GRAS
Protein Properties Length: 488aa    MW: 54950.8 Da    PI: 5.7268
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN11738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS343.53.5e-1051114873374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 + Lle A+a+++++ +++q+l++ l+el+sp+gd  q+laayf++AL +r+++s++++y++l + ++++ + +++ +++  f+evsP+  f+h++ N a
  PIN11738.1 111 DILLETAKAIADRNSARVQQLMWMLNELSSPYGDIDQKLAAYFLQALFSRMTDSGERTYQTLISASEKTCSFESTRKMVLKFQEVSPWTMFGHVASNGA 209
                 679**********************************************************96655554444444444455****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvlvak.rledleleeL 194
                 I+ea+ege+r+HiiD++ ++++QWp+Ll+a+a+R++++p+lRiT+v+ +++g      ++ ++e+g+r++kfA+ +gvpf+fnv++++ +l++l+l eL
  PIN11738.1 210 IMEAFEGESRLHIIDISNTYCTQWPTLLEAIATRTDETPHLRITTVVVAAAGggavpVQKVMKEIGNRMEKFARLMGVPFKFNVIHHSgDLSELNLAEL 308
                 ************************************************998899**9999*************************8888********** PP

        GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpreseerikvErel 289
                 ++k +Eala+n+v  lh++      + ++rd +++++++l+P++v++ve+ead++++    +Fl++f e+l+++   f++l++++pr+s+er ++Er+ 
  PIN11738.1 309 DIKDDEALAINCVGTLHSVS----MMGNRRDILISIFRRLQPRIVTIVEEEADLDGGvdglEFLRGFQESLRWFRIYFEALDESFPRTSNERLMLERA- 402
                 *******************8....7888899*********************997666777*************************************. PP

        GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg.yrve.eesgslvlgWkdrpLvsvSaWr 374
                  gr++v++vac  ++++er+et+ +W +rl+  GF+pv ++ ++ +++++llr++k +g  +v+ ++s+ ++l Wkd+p+v++SaW+
  PIN11738.1 403 AGRAVVDLVACPPEASVERRETAVQWCRRLSGGGFSPVLFN-EVCDDVRALLRRYK-EGwSMVQcSDSAGIFLSWKDQPVVWASAWK 487
                 **************************************775.6889**********.552666645567777**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    
MDTLFRLVSL QSDQSFNSST TSSTSRSSRQ NPFHQECVNV FMDDEDFSSS SSRHYNPYHH  60
HQPPSNTATP TTTTTGSNTP THHHASYDQF SDVNLEFSHS LSGQNTKWAN DILLETAKAI  120
ADRNSARVQQ LMWMLNELSS PYGDIDQKLA AYFLQALFSR MTDSGERTYQ TLISASEKTC  180
SFESTRKMVL KFQEVSPWTM FGHVASNGAI MEAFEGESRL HIIDISNTYC TQWPTLLEAI  240
ATRTDETPHL RITTVVVAAA GGGAVPVQKV MKEIGNRMEK FARLMGVPFK FNVIHHSGDL  300
SELNLAELDI KDDEALAINC VGTLHSVSMM GNRRDILISI FRRLQPRIVT IVEEEADLDG  360
GVDGLEFLRG FQESLRWFRI YFEALDESFP RTSNERLMLE RAAGRAVVDL VACPPEASVE  420
RRETAVQWCR RLSGGGFSPV LFNEVCDDVR ALLRRYKEGW SMVQCSDSAG IFLSWKDQPV  480
VWASAWKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein