PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN11498.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

SBP

Protein Properties

Length: 469aa MW: 50745.4 Da PI: 8.0536

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN11498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.5	6e-41	182	258	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC++dls akeyhr+h+vC+ hsk p+v+v g+e+rfCqqCsrfh+lsefDe+krsCrrrL++hn+rrrk+ + PIN11498.1 182 CQVEGCTVDLSLAKEYHRKHRVCDSHSKFPKVIVGGVERRFCQQCSRFHSLSEFDEKKRSCRRRLSDHNARRRKPPQ 258 **************************************************************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MSHFPEMEWN SKWDWENFVS FGSKAIESPK KLQLADWMIV DDGEIHGGSF NLSAGGGNSG 60 SDGGHGSSAK SSISASTDSS IKDGVQTPNF GFSTFEGSSG NFSKKMETKG GEASGTSSPV 120 EASVGSGEPL IGLKLGKRTY FENSGGGGAV KTTSFGGSVM PTPSTTTLKK TKSSGQTAPI 180 FCQVEGCTVD LSLAKEYHRK HRVCDSHSKF PKVIVGGVER RFCQQCSRFH SLSEFDEKKR 240 SCRRRLSDHN ARRRKPPQET IQFNSTRLSA PFYGGSQQMS FMLNNSPLIH SKTPASSSWD 300 SACNPKFTLT KGYQLKSNGD GGTDEQFHIP GIKLPHAINT QSAANGLLAS KNSTSEILNP 360 GSKGSLISSL DAAPEYRRAL SLLSSGSWDS CEPESVPLQH QMHENDPTIT KPMIHAIPEG 420 VPLTSSELWL SGQHPTHSRD QSLPTNSNFQ EIQLFKTPFD ADFYSNVLN

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MSHFPEMEWN SKWDWENFVS FGSKAIESPK KLQLADWMIV DDGEIHGGSF NLSAGGGNSG  60
SDGGHGSSAK SSISASTDSS IKDGVQTPNF GFSTFEGSSG NFSKKMETKG GEASGTSSPV  120
EASVGSGEPL IGLKLGKRTY FENSGGGGAV KTTSFGGSVM PTPSTTTLKK TKSSGQTAPI  180
FCQVEGCTVD LSLAKEYHRK HRVCDSHSKF PKVIVGGVER RFCQQCSRFH SLSEFDEKKR  240
SCRRRLSDHN ARRRKPPQET IQFNSTRLSA PFYGGSQQMS FMLNNSPLIH SKTPASSSWD  300
SACNPKFTLT KGYQLKSNGD GGTDEQFHIP GIKLPHAINT QSAANGLLAS KNSTSEILNP  360
GSKGSLISSL DAAPEYRRAL SLLSSGSWDS CEPESVPLQH QMHENDPTIT KPMIHAIPEG  420
VPLTSSELWL SGQHPTHSRD QSLPTNSNFQ EIQLFKTPFD ADFYSNVLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	255	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-62	SBP family protein