PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN11335.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 260aa MW: 28862.5 Da PI: 7.9154 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.6 | 1e-18 | 117 | 171 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee F+++++++ +++++LA++l+L rqV vWFqNrRa+ k PIN11335.1 117 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARELKLRPRQVEVWFQNRRARTK 171 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 122.7 | 1.7e-39 | 117 | 204 | 1 | 88 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 +kk+rl+k q++lLEesF+++++L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ PIN11335.1 117 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARELKLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK 204 69************************************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MGIDDLCDTG LALGLGLSWA SSNGENKYQK PSAAQNNLKN SEPSLTLSLS GETLNPVKKV 60 DFDYNKVVCN DQGQDSAASS FSNVSVKRER DVGGDEVEIE RGCSRVSDED DDGSNGRKKL 120 RLTKAQSALL EESFKQHSTL NPKQKQDLAR ELKLRPRQVE VWFQNRRART KLKQTEVDCE 180 FLKKCCETLT DENRRLQKEL QELKLAQPLY MRLPAATLTM CPSCERIGGT GAAENAAKSP 240 FTMAPKPHFF NPFTNPSAAC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 166 | 174 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 2e-81 | HD-ZIP family protein |