PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10551.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

Trihelix

Protein Properties

Length: 446aa MW: 51512.2 Da PI: 6.6311

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10551.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	76	6e-24	121	218	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+ +v++Li+a++++ e+ ++ +kk++W++vsk+m+erg +sp+qC++k+++lnkryk+++e+ +++ ++e++++ +++d ++ PIN10551.1 121 KWTDTMVRLLITAVSYISEEAAAEYtggprrklsnlQKKGKWKSVSKVMAERGHFVSPQQCEDKFNDLNKRYKRLNEILGRGtSCEVVENPALLDVMD 218 7************999999875334456667778********************************************6699999999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MEGNLSSGST MQGSASYGGF DLQGPMRVHH HQQHPFALHH QNNTHPRQGS SMVHPTIHEN 60 FPLTIGGNQD CDQTVSLADY NKLDRGKSAS DEDEPSFMED NADGRNDPGK GKKASPWQRV 120 KWTDTMVRLL ITAVSYISEE AAAEYTGGPR RKLSNLQKKG KWKSVSKVMA ERGHFVSPQQ 180 CEDKFNDLNK RYKRLNEILG RGTSCEVVEN PALLDVMDQI SEKSKEEVRK ILSSKHLHYE 240 EMCSYHNGNR LHLPPDPELQ HSLRLALMPR DDHDDNDVKR HRNDNDEFEQ EAEFDDHDGS 300 EENQSLSGDH RAYGFPGSSA KRAKQCQSRE DFSLRNSLNP LDCNKSFNFQ TENASGEVSQ 360 VPTEGTKNQM LQKQWINHRN LQLEEQRLHI QGQTLELEKE RFKWQRFCRK KDRELEMMKM 420 EIERMKLENE RMALELRRKE MGLDNN

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MEGNLSSGST MQGSASYGGF DLQGPMRVHH HQQHPFALHH QNNTHPRQGS SMVHPTIHEN  60
FPLTIGGNQD CDQTVSLADY NKLDRGKSAS DEDEPSFMED NADGRNDPGK GKKASPWQRV  120
KWTDTMVRLL ITAVSYISEE AAAEYTGGPR RKLSNLQKKG KWKSVSKVMA ERGHFVSPQQ  180
CEDKFNDLNK RYKRLNEILG RGTSCEVVEN PALLDVMDQI SEKSKEEVRK ILSSKHLHYE  240
EMCSYHNGNR LHLPPDPELQ HSLRLALMPR DDHDDNDVKR HRNDNDEFEQ EAEFDDHDGS  300
EENQSLSGDH RAYGFPGSSA KRAKQCQSRE DFSLRNSLNP LDCNKSFNFQ TENASGEVSQ  360
VPTEGTKNQM LQKQWINHRN LQLEEQRLHI QGQTLELEKE RFKWQRFCRK KDRELEMMKM  420
EIERMKLENE RMALELRRKE MGLDNN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	399	411	KERFKWQRFCRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-147	Trihelix family protein