PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN10398.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family ERF
Protein Properties Length: 271aa    MW: 29963.1 Da    PI: 5.2801
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN10398.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20123172255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+W+AeIrdp+    + +r++lg+f tae+Aa+a+++a+ +++g
  PIN10398.1 123 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFETAEDAARAYDKAAIEFRG 172
                 59*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MQRSNKRIKQ EETNSNSNSS GSLMTAALPP PPPRLTTDEE VSVMVAALKN VITGVDTQDF  60
NFLSRAASSD GLFSVSDDME TCRFCKIKGC LGCNFFDEEN KINNNASAAV GQQAAGKKRK  120
KKNYRGVRQR PWGKWAAEIR DPRKAARVWL GTFETAEDAA RAYDKAAIEF RGPRAKLNFP  180
FSDYTAASPA AASAATTSSQ HEEIYVTELQ KKKEKEDEGR SMEFGSTSSN NDQKDFWNLM  240
VNDDEIERWM TMMDFNGDSS DSANGGNADS A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117121KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-35ERF family protein