PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN10129.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 415aa MW: 45715.5 Da PI: 7.2223

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN10129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	3.9e-32	222	275	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PIN10129.1 222 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 275 9****************************************************7 PP
2	Myb_DNA-binding	46.6	7.8e-15	223	274	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PIN10129.1 223 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 274 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MPLQGIFIEP SSSKPAPDLS LNICPPNTNS ASSSHNKPKS FSSFIDLSLS HPANQEMNTF 60 FNGGRPHQEE QILPQNPYHH HFYQSNSHGV SVLDHASDGL RPIKGIPVYQ NRSFPFLPAC 120 RSDRDPKMSA LYQISPSSPY LAGGLDNHMP FLNPGNNASS SVAAYRIHGG GGGRCNGLSS 180 TTTSYQMQHH YHNHYGIGTT QDAIMRPRFV PRLPAKRSMR APRMRWTSTL HARFVHAVEL 240 LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD KPAASSGHSD GSGEDDLTTM 300 GSSGEPAGLR LFMNQREGSL PQDGDYSPST TPTLWSNSSS SREGWLQANN AGESNGLIRS 360 SSFPSQLNSA SMIEERENSG PNNYVESISE NYKRPSLEFT LGLNRPDWDQ DEEQN

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MPLQGIFIEP SSSKPAPDLS LNICPPNTNS ASSSHNKPKS FSSFIDLSLS HPANQEMNTF  60
FNGGRPHQEE QILPQNPYHH HFYQSNSHGV SVLDHASDGL RPIKGIPVYQ NRSFPFLPAC  120
RSDRDPKMSA LYQISPSSPY LAGGLDNHMP FLNPGNNASS SVAAYRIHGG GGGRCNGLSS  180
TTTSYQMQHH YHNHYGIGTT QDAIMRPRFV PRLPAKRSMR APRMRWTSTL HARFVHAVEL  240
LGGHERATPK SVLELMDVKD LTLAHVKSHL QMYRTVKTTD KPAASSGHSD GSGEDDLTTM  300
GSSGEPAGLR LFMNQREGSL PQDGDYSPST TPTLWSNSSS SREGWLQANN AGESNGLIRS  360
SSFPSQLNSA SMIEERENSG PNNYVESISE NYKRPSLEFT LGLNRPDWDQ DEEQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	5e-65	G2-like family protein