PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN09803.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 306aa MW: 34271.4 Da PI: 7.4407 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61 | 2.4e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv++++++G g+W++ ++ g+ R++k+c++rw +yl PIN09803.1 14 KGPWTPEEDEKLVEYINKHGHGSWRSLPKLAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 49.2 | 1.2e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia+ ++ gRt++++k+ w+++l PIN09803.1 67 RGPFSPEEEKVVIQLHAILGNR-WAAIASQLP-GRTDNEIKNLWNTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence |
MGRAPCCDKK GLKKGPWTPE EDEKLVEYIN KHGHGSWRSL PKLAGLLRCG KSCRLRWTNY 60 LRPDIKRGPF SPEEEKVVIQ LHAILGNRWA AIASQLPGRT DNEIKNLWNT HLRKRLLSMG 120 IDPQTHKPST SNETINRLPS SPSTRHMAQW ESARLEAEAR LSRESLLLVP SSIGKPEADY 180 FLRLWNSEVG ETFRMLKNGE KADSQGKLSS SSSTKSGSLS GTTTEMGPIA ADSSNQNDDT 240 RCYLKAGIDS CSSNELEEES SESTLQLLLD FPSNNDMSFL EHNDCYGLYP GFYTESCSYN 300 AYKNGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61250.1 | 1e-114 | MYB family protein |