PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN09591.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | WRKY | ||||||||
Protein Properties | Length: 174aa MW: 19204.7 Da PI: 7.7709 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 36.6 | 8.9e-12 | 110 | 154 | 17 | 58 |
T-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 17 gsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 ++e rsYYrC + +Cp++k ++rs++dp+++e+ Y+g+ ++ PIN09591.1 110 DNELRRSYYRCVCRfthDCPATKALQRSDKDPSTFEVAYSGKNTC 154 57889******988888************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MVPVFVLTGR TMESETTQSV FSRKTLEYDI TRGMEQVKQL RMSSSGKQES ALERMLASYE 60 EAPLSILKEI ASDGQGQSVV SPSSDTPGAS MSINKVQCED SNTISIPPLD NELRRSYYRC 120 VCRFTHDCPA TKALQRSDKD PSTFEVAYSG KNTCIGQAHV VPQRVPKSTV CKPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46400.1 | 3e-13 | WRKY family protein |