PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN09165.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

CPP

Protein Properties

Length: 726aa MW: 79571.6 Da PI: 5.0572

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN09165.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.7	3.5e-16	483	521	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +k+CnCkkskClk+YCeCfaag++C e C C dC+Nk PIN09165.1 483 ACKRCNCKKSKCLKLYCECFAAGVYCVEPCACIDCFNKP 521 589**********************************96 PP
2	TCR	51.2	2.4e-16	568	606	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++ g+ Cs +C+Ce+CkN PIN09165.1 568 RHKRGCNCKKSGCLKKYCECYQGGVGCSINCRCEGCKNA 606 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence
MFHLFYNCLY RLDFCLVNWS LGMIVFTLFM QESPVFNFLN SLSPIKPVKS IHITQTINPL 60 TFASLPSVFT SPHVNSLKGS RFLRRHQLSD PSKPEFSSDD ASTIDTNKEN VDGTKQLDEQ 120 RENLDTRPND DEEGGEPSFD CSKFVVEFAE DLSYDCNSPN SGLKANCVAD YASSSLTVVP 180 VVKEGSQRGS YGTEVNMEGV SQIDQTKEGT SCQWENLITD ASDLLIFESP TDTDSYNKAI 240 DPGMSFYTSI KNDMQNMHTL SAVGAAGEGS EQEHLSTQPG EGNEMIEIAE TYDIIAGASA 300 NNPGEKIDYE HLSSLYRGMR RRCLVFEMGG ARRKHLEENS GSDSSALLQS DGNTSSNDHK 360 LMPTKTGGES SRRVLPGIGL HLNALATTPK DYKIVNNDSS ASGRLLIGPS SSLNFRPSTT 420 AQELVNSILP IPSSDREMDS VENAALPMED ASQASVYMAN EEINQSSPKK KRRRVEQAGE 480 GEACKRCNCK KSKCLKLYCE CFAAGVYCVE PCACIDCFNK PIHEDTVLAT RKQIESRNPL 540 AFAPKVIRGP DSLSETGDDS SKTPASARHK RGCNCKKSGC LKKYCECYQG GVGCSINCRC 600 EGCKNAFGRK DGSGVIGMEA EVEDDEVDTS EKNMLDREFQ KAAIETDLEQ NMDSAPPATP 660 LRPGRQSVQL PFSSKKKPPR SSFPSVGSSS GLYPTQGFGK PSFVQPPPPK FDKHFETVRE 720 XETQAT

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence

MFHLFYNCLY RLDFCLVNWS LGMIVFTLFM QESPVFNFLN SLSPIKPVKS IHITQTINPL  60
TFASLPSVFT SPHVNSLKGS RFLRRHQLSD PSKPEFSSDD ASTIDTNKEN VDGTKQLDEQ  120
RENLDTRPND DEEGGEPSFD CSKFVVEFAE DLSYDCNSPN SGLKANCVAD YASSSLTVVP  180
VVKEGSQRGS YGTEVNMEGV SQIDQTKEGT SCQWENLITD ASDLLIFESP TDTDSYNKAI  240
DPGMSFYTSI KNDMQNMHTL SAVGAAGEGS EQEHLSTQPG EGNEMIEIAE TYDIIAGASA  300
NNPGEKIDYE HLSSLYRGMR RRCLVFEMGG ARRKHLEENS GSDSSALLQS DGNTSSNDHK  360
LMPTKTGGES SRRVLPGIGL HLNALATTPK DYKIVNNDSS ASGRLLIGPS SSLNFRPSTT  420
AQELVNSILP IPSSDREMDS VENAALPMED ASQASVYMAN EEINQSSPKK KRRRVEQAGE  480
GEACKRCNCK KSKCLKLYCE CFAAGVYCVE PCACIDCFNK PIHEDTVLAT RKQIESRNPL  540
AFAPKVIRGP DSLSETGDDS SKTPASARHK RGCNCKKSGC LKKYCECYQG GVGCSINCRC  600
EGCKNAFGRK DGSGVIGMEA EVEDDEVDTS EKNMLDREFQ KAAIETDLEQ NMDSAPPATP  660
LRPGRQSVQL PFSSKKKPPR SSFPSVGSSS GLYPTQGFGK PSFVQPPPPK FDKHFETVRE  720
XETQAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	469	474	KKKRRR
2	471	475	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-138	CPP family protein