PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09159.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 327aa    MW: 35349.7 Da    PI: 6.1699
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.31.9e-17241274134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  PIN09159.1 241 CLHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 274
                 99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MESNFMDEID CGNFFDQIDD LIEFPPENEC GDGNLVGSGD CKDFPAMWDD TLPDCDPLFT  60
GSSVSDLSAE LSVPYEDIVQ LEWLSTFVED SFSGGGLTLG KENLCTNKDS LSHSQFQTSS  120
PVSVLESSSS SSSSCSGGKT VPLSPTHRGP QRARSKRPRP ATFNPRAPIQ LISPSSSIEI  180
PHPLVTPRLP ESDNSAESTL IKKTPKPAGA EPKKAKKIKI TFSAEPTPMD HNPPAQAVRK  240
CLHCEITKTP QWRAGPMGPK TLCNACGVRY KSGRLFPEYR PAASPTFVPS LHSNSHKKVL  300
EMRNKGDGSA GATITSQTAK EPELVRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156160KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.24e-41GATA family protein