PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN09155.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HD-ZIP
Protein Properties Length: 793aa    MW: 87098.9 Da    PI: 6.9868
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN09155.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox47.62.8e-152077457
                -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                  ++t+eq+e+Le+++ ++++p+ ++re++ +k     g++ +q k+WFqNrR +ek+
  PIN09155.1 20 YARYTEEQIEVLEKVYGECSNPNSSQRERILRKQpclnGINSKQLKIWFQNRRFREKQ 77
                5689***************************99999********************97 PP
2START91.91.3e-291493243173
                 HHHHHHHHHHHHHHC-TT-EEEE.EXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   3 aeeaaqelvkkalaeepgWvkss.esengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 aee+ +e+++ka  ++  W      ++++  ++  +  s++  g a+ra++    ++ +  e+l +++  W+++++k+++l+v   +  ga++l ++++
  PIN09155.1 149 AEETRNEFLSKAIGTAIKWNPILtVKLPNLSSIGAIYVSDTGIGVAARACTRISFDPLKTIEILKNRP-AWSRDCRKMDVLAVYPANngGAIELVYTQY 246
                 677777888888888888877776566666666655555556899*************9999999999.**************998888********** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlk 173
                 +a++++++ Rdf+++Ry+  l +g++v+++ Sv+  + +p+     ++vR+++l Sg+li+p+++g s +  v+h+dl+
  PIN09155.1 247 YAPTTMACaRDFWTLRYTSVLDDGSLVVCEKSVSASDTVPSspaALEFVRGTMLASGCLIQPCEGG-SAINLVSHFDLE 324
                 **********************************9999998888889******************9.**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 793 aa     Download sequence    
MAGTENVVGE CSRRVKGAKY ARYTEEQIEV LEKVYGECSN PNSSQRERIL RKQPCLNGIN  60
SKQLKIWFQN RRFREKQKKE NDELLAENKK LAVANKLLRE ENENLQKKLT SRPSTAITAT  120
TTDVSLLAGA TSSQLSIRIA DNNSLLLLAE ETRNEFLSKA IGTAIKWNPI LTVKLPNLSS  180
IGAIYVSDTG IGVAARACTR ISFDPLKTIE ILKNRPAWSR DCRKMDVLAV YPANNGGAIE  240
LVYTQYYAPT TMACARDFWT LRYTSVLDDG SLVVCEKSVS ASDTVPSSPA ALEFVRGTML  300
ASGCLIQPCE GGSAINLVSH FDLEALYFID HVASDKNFRK IHAYDEDPAF VRTFSQRVSR  360
GFNDAINGFI EDGWTLMTAD GPGDVIVSIK QLKNHEDNAN HYSVICMKAS LLLQNVLPAR  420
LATLLKERRS SWMNFNFSEH SAAFSRAASS FPGLNTHNLS ENVARLGRTN NGDEILEVNR  480
FDRVGSHQRN VSSGDLYHLQ ICSGMGDTGY EACSELIFAP IDRTLPDDAA LLSSGFRIFL  540
LGSKTLPTDG QGSRSSANIA SAEAYNTYGL GAALSYPCSL LILAFQFPCE TYLKDDVASM  600
ALKYVQHIIS SVRKISLEAT SSSLNPVMNS IEANPGTGAM AVPESSYAVS LANSIVQSYR  660
TNLGVEMPGF KPQSTNSSFE LIQHHPYAIL YFSFTSLPMC LYANQAGLNM LETTTNSLVS  720
LTVDKMLSGS TNVTLSSILP TIMQQGYTII PPAFFLSEKS RCVTYEQGVV WHVQGPDGSI  780
HGLAFAFVNW SFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein