PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN08543.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 293aa MW: 33322.3 Da PI: 5.9472 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.4 | 7e-08 | 14 | 43 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 rg W++eEde+l ++++ +G g+W+ ++++ PIN08543.1 14 RGLWSPEEDEKLNKYITTHGYGCWSEVPEK 43 788***********************9986 PP | |||||||
2 | Myb_DNA-binding | 53.6 | 5e-17 | 70 | 114 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ ++ G++ W+ Ia++++ gRt++++k++w+++ PIN08543.1 70 RGRFTPEEEKLIISLHGAVGNR-WAHIASHLP-GRTDNEIKNYWNSW 114 89********************.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence |
MGRHSCCNQQ RVKRGLWSPE EDEKLNKYIT THGYGCWSEV PEKAAIIVCV EDVEWICVCR 60 ASKMREKLTR GRFTPEEEKL IISLHGAVGN RWAHIASHLP GRTDNEIKNY WNSWIKKKIR 120 RSSSSTSTST HQTSQLTYSQ NQHLEFLNQD LSTKSQLQDT LFSSPNPSFI FNNNGSTPEG 180 LNTNNTPSLD HIFQENEVLM KQHHDHAAMV QFMCPIYSSF LEIENSVVPI EGQIPSLDCA 240 QRNENMNVEW VDTQNCAGYF FWEQAELGQL GGEEMTASSS NMGTLLSPFP TSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63910.1 | 2e-62 | MYB family protein |