PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN08389.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 277aa    MW: 30596.6 Da    PI: 9.6325
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN08389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.42.3e-19140173134
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                 C+ C+ttkTplWR+gp g+k+LCnaCG+++rk +
  PIN08389.1 140 CADCHTTKTPLWRSGPKGPKSLCNACGIRQRKAR 173
                 *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MNLNSPPFPI DQINLHDHIH HQQYPFASNH QLASSSSSCH FFTQDHSGYF RPQFYHQKNE  60
NYGYDGGSPY EIKNKVDGGA LKLTLWKKED EGPADQNKLI KKMKITCKVE DQKVQPSSSL  120
ETDLSSNSSP YNCNSPVRVC ADCHTTKTPL WRSGPKGPKS LCNACGIRQR KARRAMAAAA  180
AAANGTAVVS DQPPAIMKIK LKHKEKMDKN GHSSQLKKRG KMASAAGSSS DSEQKKLGFE  240
DFLINLSNNL SFHRVFPQDE KDAAILLMAL SSGLVHG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216222LKKRGKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.12e-28GATA family protein