PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN07387.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB_related | ||||||||
Protein Properties | Length: 178aa MW: 20058.5 Da PI: 4.7445 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.3 | 8.5e-09 | 6 | 30 | 20 | 46 |
TTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqk 46 G++ W+ Ia+ ++ gRt++++k++w++ PIN07387.1 6 GSR-WSIIAAQLP-GRTDNDIKNYWNT 30 778.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MYITIGSRWS IIAAQLPGRT DNDIKNYWNT RLKKKLLGKH RREQQAGKQF VTKKGCESLY 60 PPPPQTVAAP PLLVKDQLHD SNSVDDVLLM PQLEAKFCYD DQNFESFQYF SDFSCPESHE 120 QVGINFPGFD DILMYSVPPQ LDGVQSFSPV DMVNGSTVSS VSQDNSSWGD ISSLVYQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 2e-17 | MYB family protein |