PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN07384.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HD-ZIP

Protein Properties

Length: 276aa MW: 31150.3 Da PI: 7.9927

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN07384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.9	3.4e-18	133	185	4	56
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++k q Lee F+++++++ ++++eLA++l+L rqV vWFqNrRa+ k PIN07384.1 133 KLRLSKAQSALLEESFKQHSTLNPKQKQELARELKLRPRQVEVWFQNRRARTK 185 567899*********************************************98 PP
2	HD-ZIP_I/II	123.2	1.2e-39	132	220	2	91
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 kk+rlsk q++lLEesF+++++L+p++K+elareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l PIN07384.1 132 KKLRLSKAQSALLEESFKQHSTLNPKQKQELARELKLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK-AL 220 9*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MGLDDLYNTG LDLGLGFSSS TVELKHKKPV TVQKFDQGKI CEPSLTLSLS GETYDLINPP 60 VKKVDSHDKC YNKGVFNDHH QAVDLYRQDS AASSFSNVSV KREREIGSEE VEIERISSRV 120 SDEDDDGSNV SKKLRLSKAQ SALLEESFKQ HSTLNPKQKQ ELARELKLRP RQVEVWFQNR 180 RARTKLKQTE VDCEFLKKCC ETLTDENRRL QKELQELKAL KLAQPLYMQL PAATLTMCPS 240 CERIGGGVPE NAAKSPYVMA PKPHFYNPFT NPSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	188	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	5e-78	HD-ZIP family protein