PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06973.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 517aa MW: 54622.6 Da PI: 8.5412

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06973.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.5e-05	65	87	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H PIN06973.1 65 FVCEICNKGFQRDQNLQLHRRGH 87 89*******************88 PP
2	zf-C2H2	17.1	1.5e-05	141	163	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k + +s+ k H++t+ PIN06973.1 141 YKCERCSKKYAVQSDWKAHMKTC 163 9********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MAEMEISSPA SASPVSKESN LPDNQTKSVE TAQPTKKKRN LPGMPDPDAE VIALSPKTLL 60 ATNRFVCEIC NKGFQRDQNL QLHRRGHNLP WKLRQRTSKE IRKRVYVCPE PTCIHHDPLR 120 ALGDLTGIKK HFCRKHGEKK YKCERCSKKY AVQSDWKAHM KTCGTREYRC DCGTLFSRRD 180 SFITHRAFCD ALAQESGRSQ PLVFTSSAGD LKPPPPAASS PPPQPLTPST GVLSPVLSIQ 240 SSAELPENQI AHLQPLPLPP PPPPGAITAT SSTTTTVTTT PTTSSTSSGR IVPCATGVLT 300 SVLNASTSTE LSQSSIQPPP YTGLLSTMAG PDYPAIDPVS LSLSSSLYGA SSLFATTPQN 360 LEQHYASGPQ PTLSATALLQ KAAQMGATSS NSLFLRGLGL AVPSPSDPQD NASTMASTTT 420 STPSHWNGEN NFGLGLGLPS SGSPRFNELM MSSSTIFANK PTTLDFLGLG MGAGGATSGG 480 FSAFLSSIGG GIDGSFSGVG SAGDAWDDPP DRKPSLL

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MAEMEISSPA SASPVSKESN LPDNQTKSVE TAQPTKKKRN LPGMPDPDAE VIALSPKTLL  60
ATNRFVCEIC NKGFQRDQNL QLHRRGHNLP WKLRQRTSKE IRKRVYVCPE PTCIHHDPLR  120
ALGDLTGIKK HFCRKHGEKK YKCERCSKKY AVQSDWKAHM KTCGTREYRC DCGTLFSRRD  180
SFITHRAFCD ALAQESGRSQ PLVFTSSAGD LKPPPPAASS PPPQPLTPST GVLSPVLSIQ  240
SSAELPENQI AHLQPLPLPP PPPPGAITAT SSTTTTVTTT PTTSSTSSGR IVPCATGVLT  300
SVLNASTSTE LSQSSIQPPP YTGLLSTMAG PDYPAIDPVS LSLSSSLYGA SSLFATTPQN  360
LEQHYASGPQ PTLSATALLQ KAAQMGATSS NSLFLRGLGL AVPSPSDPQD NASTMASTTT  420
STPSHWNGEN NFGLGLGLPS SGSPRFNELM MSSSTIFANK PTTLDFLGLG MGAGGATSGG  480
FSAFLSSIGG GIDGSFSGVG SAGDAWDDPP DRKPSLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-111	C2H2 family protein