PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN06874.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family Nin-like
Protein Properties Length: 285aa    MW: 32700.1 Da    PI: 7.4996
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN06874.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK841.4e-26126176252
      RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                 +k++s +++s+yF++pi++AAkeL+v+lT+LK++CR++GI RWPhRk+ sl
  PIN06874.1 126 SKKLSRKTISQYFYMPITQAAKELNVGLTLLKKRCRELGIWRWPHRKLMSL 176
                 689*********************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MEKTKHSLNM GWSNCNNQVN IAKEEYEDVF SFLSELQLPP LDFSFSTGWD FGMQEAVFDP  60
IPLAEMLLNE PFYNPPLDLT QNNSSAPNIP DVHVWNSGTA IWDETRTGVL DQKKRQVQVK  120
NSSSSSKKLS RKTISQYFYM PITQAAKELN VGLTLLKKRC RELGIWRWPH RKLMSLQTLI  180
NNVEELGKEE GEDKLKQSIE ILEQEKKLME ESPDLQLEDK TKRLRQACFK ANYKKRKLMG  240
ITTTNHSSNP KSAASTTYNH PSLANEELKY FLSDCFSSSS SGLMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.15e-45Nin-like family protein