PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06868.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

FAR1

Protein Properties

Length: 672aa MW: 78133.7 Da PI: 6.6012

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06868.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71	2.7e-22	61	141	2	88
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 fYn YAk+ GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+++++eleHnH PIN06868.1 61 FYNCYAKQQGFGVRVSNTWYR-KSKEKYRGKLSCSSAGFKKKTEAN-----RPRPETRTGCPAMIKFRLMDNKRWRIIEVELEHNHL 141 9*************99997.66779**********98877.....*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MDEVSLNSEP AYDDEVEEFE IDGECTMTEY VGQTGNILHG DNPLPPAVGM EFESYDDVYY 60 FYNCYAKQQG FGVRVSNTWY RKSKEKYRGK LSCSSAGFKK KTEANRPRPE TRTGCPAMIK 120 FRLMDNKRWR IIEVELEHNH LTSPTSGKSY KSHRIMDLGN KRPLPIDGGE VHKIRLFRTV 180 VIDVEDNGIL NFDEGEFRNN INKGNNKLNL KHGDAQEMLK FFTRMQLSDP SFFYVMDVNE 240 KGCLRNVFWA ESRCRAAHSY FGDVLFIDTT SLIEKYEVPL VVFIGVNHHA QTMSLGCGLV 300 SSSTIESFIW LFRAWLTYMV GRPPQTVITS QRKSLQTAIA EVFPRAFHCL SLTNIMKKVP 360 SELEGLEECD AIRRALTRAV YDSLRVDEFE AAWDNMVQSY RLVDHKWFKT LYEDRKRWAP 420 VYLKDIFLGG MIPVKESEIV TSPFVEYLSQ HSSLREFLNS YDRALLEMDQ RETLSDVESR 480 NASCLLKSRF YFELQLSKLY TNNIFQKFQD EIEGMYSCFS IRQISNDGSV ATYIVKEDVQ 540 VEENRRETRD FEVMYNASDA DVHCACGLFN FRGYLCRHAL GVINQIGLEE IPPQYVLARW 600 RKDIKRNYVF THGSNGIDIK NPVHRYDKLY QCVLKVVEEG RKTHDRYKFT SRSLEEILNK 660 VHLQEDYPAN SL

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MDEVSLNSEP AYDDEVEEFE IDGECTMTEY VGQTGNILHG DNPLPPAVGM EFESYDDVYY  60
FYNCYAKQQG FGVRVSNTWY RKSKEKYRGK LSCSSAGFKK KTEANRPRPE TRTGCPAMIK  120
FRLMDNKRWR IIEVELEHNH LTSPTSGKSY KSHRIMDLGN KRPLPIDGGE VHKIRLFRTV  180
VIDVEDNGIL NFDEGEFRNN INKGNNKLNL KHGDAQEMLK FFTRMQLSDP SFFYVMDVNE  240
KGCLRNVFWA ESRCRAAHSY FGDVLFIDTT SLIEKYEVPL VVFIGVNHHA QTMSLGCGLV  300
SSSTIESFIW LFRAWLTYMV GRPPQTVITS QRKSLQTAIA EVFPRAFHCL SLTNIMKKVP  360
SELEGLEECD AIRRALTRAV YDSLRVDEFE AAWDNMVQSY RLVDHKWFKT LYEDRKRWAP  420
VYLKDIFLGG MIPVKESEIV TSPFVEYLSQ HSSLREFLNS YDRALLEMDQ RETLSDVESR  480
NASCLLKSRF YFELQLSKLY TNNIFQKFQD EIEGMYSCFS IRQISNDGSV ATYIVKEDVQ  540
VEENRRETRD FEVMYNASDA DVHCACGLFN FRGYLCRHAL GVINQIGLEE IPPQYVLARW  600
RKDIKRNYVF THGSNGIDIK NPVHRYDKLY QCVLKVVEEG RKTHDRYKFT SRSLEEILNK  660
VHLQEDYPAN SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein