PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN06684.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | WRKY | ||||||||
Protein Properties | Length: 240aa MW: 26979.1 Da PI: 5.7064 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.1 | 2.5e-30 | 46 | 104 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++ +tY+ eHnh+ PIN06684.1 46 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSKVDPTMLMVTYTCEHNHP 104 69*************************998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MSRDTKISSA SSSKRSRKAI HKRVVSVPIK DAKKLKGDHQ IGAPPSDSWA WRKYGQKPIK 60 GSPYPRGYYR CSSSKGCPAR KQVERSKVDP TMLMVTYTCE HNHPWPAASR NHRHGIAVAS 120 GGATTASVLE EDSEEEEEEE EEKKPIISNQ SEEVNSEDRF SNFCEFSWFT DFESTNCTLL 180 ESPISAEDRI TTDNEMAMIF TMREEDEPLF ADLGELPECS TVFRRGMVEQ CRLSLATGTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 9e-65 | WRKY family protein |