PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN06558.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | ERF | ||||||||
Protein Properties | Length: 225aa MW: 25145.6 Da PI: 10.7511 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.3 | 1.2e-20 | 19 | 68 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++aa+++++g PIN06558.1 19 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAARQFRG 68 58*******.**********8...557************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MAPRVRAAPV GKRLDNEMHF RGVRKRPWGR YAAEIRDPGK KSRVWLGTFD TAEEAARAYD 60 AAARQFRGPK AKTNFPPPDF DEKKPNDFLN NHSPSQSSTV ESSSRETIPP PKEAAVPDST 120 FLDLTLGSRR MRFPFQKNTR LRSVAVGGGF VRILPVQTTM LHLRPESRQE IIDLMNKMRR 180 VPLEYRGGAA AQSESDSSSV VVDLPKSPIS KGINLDLNLP PPEDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 4e-26 | ERF family protein |