PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN06084.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

G2-like

Protein Properties

Length: 421aa MW: 46170.8 Da PI: 7.8032

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN06084.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4e-32	258	311	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ PIN06084.1 258 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 311 9****************************************************7 PP
2	Myb_DNA-binding	46.6	7.9e-15	259	310	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ PIN06084.1 259 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 310 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MPLEGIFLEP SSNQVPDLSL HISLPNYDSS SRIKNDAVSS FDLSANTKSS SKISNNSFTE 60 LSLAHPVNDG IDLHKSFNVA TRSQQDEHPQ NPYHHIHQFS NTQLNQTNHI ECPFDLSDGL 120 RPIKGIPVYP NRPFPFLALD HSTRENDPKM RYYQMSYPSL SSSSAASVSH HSNSPYFAGG 180 LDHHMPVLNL GHNASSSAAV YRGGVGGTAA GRFNGVASGY HQLHHQYGLG GSHETSHHGI 240 MRSKFLPKMP AKRSMRAPRM RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA 300 HVKSHLQMYR TVKTTDKPAA SSGHSDGSGE DDLSTIGSGP GDNRLGFQQF MDQRGPSDGS 360 FQQEPDHNNN NYPSNTTTLW SNSSSSREGW LQTNAGESHS LLGSSSFPSQ SNSGHLMRSV 420 R

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MPLEGIFLEP SSNQVPDLSL HISLPNYDSS SRIKNDAVSS FDLSANTKSS SKISNNSFTE  60
LSLAHPVNDG IDLHKSFNVA TRSQQDEHPQ NPYHHIHQFS NTQLNQTNHI ECPFDLSDGL  120
RPIKGIPVYP NRPFPFLALD HSTRENDPKM RYYQMSYPSL SSSSAASVSH HSNSPYFAGG  180
LDHHMPVLNL GHNASSSAAV YRGGVGGTAA GRFNGVASGY HQLHHQYGLG GSHETSHHGI  240
MRSKFLPKMP AKRSMRAPRM RWTSTLHARF VHAVELLGGH ERATPKSVLE LMDVKDLTLA  300
HVKSHLQMYR TVKTTDKPAA SSGHSDGSGE DDLSTIGSGP GDNRLGFQQF MDQRGPSDGS  360
FQQEPDHNNN NYPSNTTTLW SNSSSSREGW LQTNAGESHS LLGSSSFPSQ SNSGHLMRSV  420
R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	7e-57	G2-like family protein