PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN05851.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 274aa MW: 31149.8 Da PI: 6.252 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.7 | 3.4e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd++l +++++G +W++ +++ g+ R++k+c++rw +yl PIN05851.1 14 KGAWSEEEDDKLRAYIQRYGHWNWRLLPKYAGLARCGKSCRLRWVNYL 61 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 57.5 | 3.2e-18 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g++T++E++l++++++qlG++ W+tIa++++ gRt++++k++w+++ PIN05851.1 67 KGNFTKQEEDLIIQLHAQLGNK-WSTIAAKLP-GRTDNEIKNFWHSH 111 79********************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 274 aa Download sequence |
MVRAPFVDSN GIKKGAWSEE EDDKLRAYIQ RYGHWNWRLL PKYAGLARCG KSCRLRWVNY 60 LKPGLKKGNF TKQEEDLIIQ LHAQLGNKWS TIAAKLPGRT DNEIKNFWHS HVDKRSKKNT 120 PAKNIKGQTS YESKPSEITL CKTTPNEASS LDAIKPQHST PSFDAYDPSL LSTKEPQQDC 180 SYLPPLPEED LFYSKFNYGE LSSLDSSDYL SALDWINAND DHMSMSSDYV SQPVQGAFWA 240 DSFSSNVSDS QSEIIGYVSP QEMGGFYDPL LMYF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 8e-57 | MYB family protein |