PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05759.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 299aa MW: 32715.7 Da PI: 8.6767

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05759.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32	2.9e-10	10	58	3	47
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47 W+ eE++ + +a++++ + +W+ I+ ++ g++ ++k+++q + PIN05759.1 10 VWSREEEKAFENAIAMYWADefteqNWAHISGLVP-GKSIQELKHHYQLL 58 6********************************.*********965 PP
2	Myb_DNA-binding	38.9	2e-12	141	185	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky PIN05759.1 141 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 185 7***************************99**********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MSGGGWSGVV WSREEEKAFE NAIAMYWADE FTEQNWAHIS GLVPGKSIQE LKHHYQLLVE 60 DVAAIEAGNV PLPNYSSQEP SSSSISTTTY RDAHYREKEG RPFSNSNFSA GVVSHDSVSC 120 AAAGKGGGTA RSDQERRKGI PWTEEEHRLF LLGLDKFGKG DWRSISRNFV ISRTPTQVAS 180 HAQKYFIRLN SMNRDRRRSS IHDITSVNGD VSAAHLPPIT GQQLHPPPPT MKHQRPNIHG 240 LAMYGGAPVG QPVAVPPGRH IASAVGTPVM ISPGHHHSPY VLPVACPMPP PPPPPQMHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49010.1	3e-62	MYB family protein