PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN05635.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

bHLH

Protein Properties

Length: 404aa MW: 45707.4 Da PI: 6.3314

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN05635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.3	2.7e-13	204	251	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+h Er+RR++iN++f L +l+P+ +K++K+++L +++eY+++L+ PIN05635.1 204 RNHVLSERKRREKINERFLILGSLVPSG-----GKVDKVSVLDQTIEYLRELE 251 679999******************98.....8**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MPEDNLDQLL NCPNMGISSP DNCSNDFADN LLREESNLVE GIEGEASQMQ NWPFMDEAIS 60 NCLNNSMNSS DCVSQTHDDP DTNIPPSDGK KETNGHMHDT QECNQQKNCG PQGNDVHYQS 120 VLSNLLKSSH QLILGPYFRN GNRESSFVSW RKDGILGTRI PQKGTPQKLL KKVLFEVAKM 180 HEKSRLESSK HNGNPRPEAD ENDRNHVLSE RKRREKINER FLILGSLVPS GGKVDKVSVL 240 DQTIEYLREL ERKVAELESF KEAMELESTT QNKTQDAIDR TSDNYGPNKI VNTKKPLTNK 300 RKACEMEKID NENNRVRLRD SSTDNITMSI TETDVLIEMR CPWRDRVLLE VMEAIGKLRI 360 DTQTVQSSND DGIFYMTIKA KSKGLKAPSA GVIKQALQKV IKKC

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MPEDNLDQLL NCPNMGISSP DNCSNDFADN LLREESNLVE GIEGEASQMQ NWPFMDEAIS  60
NCLNNSMNSS DCVSQTHDDP DTNIPPSDGK KETNGHMHDT QECNQQKNCG PQGNDVHYQS  120
VLSNLLKSSH QLILGPYFRN GNRESSFVSW RKDGILGTRI PQKGTPQKLL KKVLFEVAKM  180
HEKSRLESSK HNGNPRPEAD ENDRNHVLSE RKRREKINER FLILGSLVPS GGKVDKVSVL  240
DQTIEYLREL ERKVAELESF KEAMELESTT QNKTQDAIDR TSDNYGPNKI VNTKKPLTNK  300
RKACEMEKID NENNRVRLRD SSTDNITMSI TETDVLIEMR CPWRDRVLLE VMEAIGKLRI  360
DTQTVQSSND DGIFYMTIKA KSKGLKAPSA GVIKQALQKV IKKC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	210	215	ERKRRE
2	211	216	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-86	bHLH family protein