PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN05240.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 285aa MW: 32185.4 Da PI: 6.0374 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.3 | 2.6e-16 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ ++++ G+g +W t ++++g++R++k+c++rw++yl PIN05240.1 14 RGPWSPEEDAKLKSYIEKNGTGgNWITLPHKIGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.5 | 2.6e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T++Ed l+ + G++ W+ Ia+ ++ gRt++++k++w++ PIN05240.1 69 GGFTEDEDNLICSLYINIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MGRAPCCDKA NVKRGPWSPE EDAKLKSYIE KNGTGGNWIT LPHKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FTEDEDNLIC SLYINIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLFGR 120 PRRNQYPHPP QPVAPPPDFS NPANPLCDEA AQNSLTNISI DMPPIEEKFP YDAPCFPSTL 180 TNLKNTPLVS DFHAISGVLA NDFQGYDEIP EDIMYQMPQK LEVLDSTFSV VDDMVNSSTT 240 TSAVSHESTS WGDMNCPFYP SALSTYEVCQ RKMSQEWEVL LGYSE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 2e-80 | MYB family protein |