PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04672.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family HSF
Protein Properties Length: 337aa    MW: 38977.8 Da    PI: 5.4973
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind107.31.2e-33141042101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k+ye+++d+ +++++sws++g+sfvv+++ +f++++LpkyFkh+nf+S++RQLn+YgF+k++  +         weF++++F +g+++ll++i 
    PIN04672.1  14 FLLKTYEMVDDPLTNSIVSWSHTGRSFVVWNPPDFSRDLLPKYFKHNNFSSLIRQLNTYGFRKIDPVQ---------WEFQNEEFIRGQRHLLKNIY 101
                   9****************************************************************999.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
    PIN04672.1 102 RRK 104
                   *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MDGSNGDSNS PAPFLLKTYE MVDDPLTNSI VSWSHTGRSF VVWNPPDFSR DLLPKYFKHN  60
NFSSLIRQLN TYGFRKIDPV QWEFQNEEFI RGQRHLLKNI YRRKPIHSHS GQGYVPLTDS  120
ERQDFEKKIS KLEKEKVLLQ TEVEKHKEEN RGYEYQLSSL QQTMQNIDHR QRQLMVTLAQ  180
LLQEPRYMEN SESQNKKRRL LALDLLYAEG KLAENERMTF RESSTSSSLP LLNLEQIEKL  240
DSSITFWEKF LPELNQTPSL PSRAVTEMAA SSGDSDLNVS PCSPDSPAIS SICIDLESRQ  300
KPSGIEVNMN PTKISDIEEP KDREVGANDV FWQQFLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18880.14e-75HSF family protein