PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN04541.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | NAC | ||||||||
Protein Properties | Length: 551aa MW: 61534.6 Da PI: 4.5201 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 172.3 | 1.5e-53 | 20 | 146 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 pGfrFhPtdeelv +yL++kv gk +++ ++i+e+diyk+ePwdLp +k+k+++ ewyfFs+ dkky +g r+nrat++gyWk+tg+d++v++ k++ PIN04541.1 20 GPGFRFHPTDEELVRYYLRRKVCGKAIRF-DAISEIDIYKAEPWDLPcmSKLKTRDLEWYFFSELDKKYGNGARTNRATEKGYWKTTGRDRAVYH-KTQ 116 59**************************9.99***************6347777888**************************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kktLv+++gr pkg++t+Wvmheyrl PIN04541.1 117 IVGMKKTLVYHSGRPPKGQRTNWVMHEYRL 146 ****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 551 aa Download sequence |
MSMKLKMVNK KSSISSSMLG PGFRFHPTDE ELVRYYLRRK VCGKAIRFDA ISEIDIYKAE 60 PWDLPCMSKL KTRDLEWYFF SELDKKYGNG ARTNRATEKG YWKTTGRDRA VYHKTQIVGM 120 KKTLVYHSGR PPKGQRTNWV MHEYRLTDLE LENAGVVQDA FVLCRVFQKS GSGPKNGEQY 180 GAPFVEEEWE DDDLELVTED EATGEVDFGG DAWFNSHNLQ KALGSDVPLD TAPFPSNFQC 240 ADGNYIEETT DSFNDMRRLL VHADQQNSDP EQCDDKNISN SPASYDMVVK PVEEEHNGEC 300 SKSVTSKDID YVVDESFLDS LDNFQYCDEG FLEANDLSNP IETNASAIDM LEEYLALSNA 360 NDDSSLFFAC DSAMAPGSED LVSDQALIPQ KELRKGTLQA TSPSGLLIDN NNKDAASMSA 420 KQESAKYQSD IQYPYIKKAS QMLGNIPAPP AFAAEFPSKD VTAGMIQIRN SSTGGNGTDR 480 SSNKHENFNI VLLFGFSLGN DGSSSLESSV SILQGKSLST VFRGWFYFIL LWVLVLSMSF 540 KVGTYVLQSS I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10500.1 | 1e-112 | NAC family protein |