PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN04132.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family C2H2
Protein Properties Length: 241aa    MW: 26329.2 Da    PI: 9.6349
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN04132.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.00017597123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C++C++ F ++  L  H++ H
  PIN04132.1 75 FSCNYCNRKFYSSQALGGHQNAH 97
                89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MEPPSLQPCN RSADNSSSNS RINPIEEQQQ QQIKSPDLIL DLSLSNKDSH HNSNPELALF  60
HTNTANDQSD QNRVFSCNYC NRKFYSSQAL GGHQNAHKRE RTIARRGQRL GGSATISHHD  120
TAALQYSSMS ALPLHGSLNR SLGIQVHSMI HKPSFLGSSV GRETLVCGHS GWGRRVLDQP  180
MIARLAAEGP SASGGAARFD GGRRFSTAVD GIGGFRWEGT SSHLKGSNQE EFKKLDLSLK  240
L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.19e-36C2H2 family protein