PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03411.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family NAC
Protein Properties Length: 311aa    MW: 35436.1 Da    PI: 6.8078
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM131.37.3e-41231502128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                 +pGfrF+Ptd+el+veyL +++++++l+  + i+ v++y++ P dL +  ++k+ +++ewyfF++r+kky+ g+r+ r++ +gyWkat + +++++ +g
  PIN03411.1  23 APGFRFRPTDKELIVEYLMPRINNQELPR-NLINIVKLYDFSPDDLAAsgRYKStDKNEWYFFTPRNKKYKGGSRPDRSAGDGYWKATETLRNIVH-NG 119
                 69************************999.89**************844555552566**************************************.99 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 el+g ++tLv+++g+ +kg ktdW+mhe+ +
  PIN03411.1 120 ELIGYRNTLVYHSGKPRKGIKTDWIMHEFIV 150
                 ****************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MENNAIPINV EEESDEEYFN SIAPGFRFRP TDKELIVEYL MPRINNQELP RNLINIVKLY  60
DFSPDDLAAS GRYKSTDKNE WYFFTPRNKK YKGGSRPDRS AGDGYWKATE TLRNIVHNGE  120
LIGYRNTLVY HSGKPRKGIK TDWIMHEFIV KNPPAPVQTT ENSMRVFGFL RYSHVGKFIK  180
VFSFKRKIVK LDDWVLCRLH KKAITSNNRN MNGEANNNIE QVVGDDIQNL TPVNSIVAIE  240
QVVGDEIQNL TPVNSIVALE EPVAHNEAMT QNINTYGRLQ PLGELPSSIS FNLGESFSLN  300
GIPLTSLNDQ V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.17e-44NAC family protein