PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN03221.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family GATA
Protein Properties Length: 266aa    MW: 29073.5 Da    PI: 8.2186
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN03221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.96.5e-19182216135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C +C++ kTp+WR gp g+ktLCnaCG++y++ +l
  PIN03221.1 182 CFHCQADKTPQWRAGPMGPKTLCNACGVRYKSGRL 216
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDVLRTAEEC LAVDDDLLNF TLEGEEEGPT IFNSAAATAA GFGHESQSGS SPEIAEVEEE  60
LEWLSNKDAF PTVETCFGIL SENPDLILSH RSPVSVLENN NSNSNSPKNT NSDGNSIASY  120
CNSLKVPTNH PVRSRSKRRT RRRSSFSNLT SEHRSWPNQE LLFLLPSLPT IKKKGAGMGR  180
RCFHCQADKT PQWRAGPMGP KTLCNACGVR YKSGRLLPEY RPANSPTFSS FLHSNSHKKV  240
VEIRKKKQSG AGEGIATSVA CGYSVG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133138RSRSKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.11e-41GATA family protein