PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03113.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

TALE

Protein Properties

Length: 639aa MW: 70189.7 Da PI: 9.2404

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03113.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.3	3.6e-10	374	411	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ ++++ LAk++gLt +qV++WF N R + PIN03113.1 374 FEHflHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVR 411 554459******************************88 PP
2	BELL	104.5	7.4e-34	237	308	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqe+q+kkakL s+l+eV++r kqy++q+q+vi+sFe+vag gsak Yt+lAlk+i ++FrcLk i+ qi PIN03113.1 237 QRQEIQMKKAKLNSMLDEVEQRCKQYHHQMQIVIASFEQVAGAGSAKCYTQLALKTILKQFRCLKATISAQI 308 69********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
MAMYYQGSSE IQGDALQTLY LMNPNYVGYS DTQNQPQPNM PFLNSATTTA VHALNSPLVP 60 HAPLPQFVGI PLSHDPSRPS SVLAHQDDHI QTVQTSIPRY QYNIWGLVDQ GTNGNQPNMP 120 QQNPQGLSLS LSHHQTGFDK SSIGTISPKN CSSSSLTNAT DQSNGVNTVK SVILGSKYLK 180 AAQELLDEVA NVGKGAKTTE ETRDKAKIVK ESAGAKAATA SGESGGKGGG AELSTAQRQE 240 IQMKKAKLNS MLDEVEQRCK QYHHQMQIVI ASFEQVAGAG SAKCYTQLAL KTILKQFRCL 300 KATISAQIKA LSKSLGEEES LGDHKLDGSR LKFVDHQLRQ QRALQQLGMM NNNAWRPQRG 360 LPERAVSVLR AWLFEHFLHP YPKDSDKQML AKQTGLTRSQ VSNWFINARV RLWKPMVEEM 420 YVEEMKNQEQ ITSDQDNTIQ PGLGKDLISK QQNTTRMDNR NPLQSKQDKF MLNLVNTPTE 480 ISPSTTTKSL TGSSGGFSQL ISSLNMENLP GNNPKRPRQD NSPSSILSVD VDMKGGGSRE 540 NYGTGFETYG IGELGRFNNL QGNNFSLTLG LPPSETPRGA HRNSFEFGTR IENGTSRGNG 600 INNQGVATAA NSHPNIGYEI LDFQNRKNFP AQLLPDFVA

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

MAMYYQGSSE IQGDALQTLY LMNPNYVGYS DTQNQPQPNM PFLNSATTTA VHALNSPLVP  60
HAPLPQFVGI PLSHDPSRPS SVLAHQDDHI QTVQTSIPRY QYNIWGLVDQ GTNGNQPNMP  120
QQNPQGLSLS LSHHQTGFDK SSIGTISPKN CSSSSLTNAT DQSNGVNTVK SVILGSKYLK  180
AAQELLDEVA NVGKGAKTTE ETRDKAKIVK ESAGAKAATA SGESGGKGGG AELSTAQRQE  240
IQMKKAKLNS MLDEVEQRCK QYHHQMQIVI ASFEQVAGAG SAKCYTQLAL KTILKQFRCL  300
KATISAQIKA LSKSLGEEES LGDHKLDGSR LKFVDHQLRQ QRALQQLGMM NNNAWRPQRG  360
LPERAVSVLR AWLFEHFLHP YPKDSDKQML AKQTGLTRSQ VSNWFINARV RLWKPMVEEM  420
YVEEMKNQEQ ITSDQDNTIQ PGLGKDLISK QQNTTRMDNR NPLQSKQDKF MLNLVNTPTE  480
ISPSTTTKSL TGSSGGFSQL ISSLNMENLP GNNPKRPRQD NSPSSILSVD VDMKGGGSRE  540
NYGTGFETYG IGELGRFNNL QGNNFSLTLG LPPSETPRGA HRNSFEFGTR IENGTSRGNG  600
INNQGVATAA NSHPNIGYEI LDFQNRKNFP AQLLPDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-102	TALE family protein