PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN03041.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

MYB

Protein Properties

Length: 353aa MW: 40455.2 Da PI: 9.8734

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN03041.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.4e-16	4	53	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G+++W++++ +m+ ++R +k+c +rw +yl PIN03041.1 4 RQRWRPEEDALLRAYVKQYGPRDWHLVSDRMNqpLNRDAKSCLERWKNYL 53 89**********************************************97 PP
2	Myb_DNA-binding	36.8	8.8e-12	59	103	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l v++ +++G++ Wk+Ia++++ gRt+k + +w + PIN03041.1 59 KGSLTEEEQRLVVHLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788****************.*****.***999999766 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MKERQRWRPE EDALLRAYVK QYGPRDWHLV SDRMNQPLNR DAKSCLERWK NYLKPGIKKG 60 SLTEEEQRLV VHLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE RKENNKIVEP 120 IEEGKYDHIL ETFAEKLVKE HSGSRIAMPT SNGGFLHTDP NAPLGPSVLP PWMANSGSST 180 AVRPPPPPSP SVTLTLSPLA VPPTPSIPWL QTSDRLADNA THGVMSHLPS PLVSELVECC 240 RELEEGHRSL AAHRKEAAWR LKRVELQLES EKASKRREKI EDIEAKVRAL REEEKFTLEG 300 IEADYREQLA GLRREAEVKE QKLAEQWAAK HVRLSKFLEQ MGCRSISAEP NGR

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MKERQRWRPE EDALLRAYVK QYGPRDWHLV SDRMNQPLNR DAKSCLERWK NYLKPGIKKG  60
SLTEEEQRLV VHLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE RKENNKIVEP  120
IEEGKYDHIL ETFAEKLVKE HSGSRIAMPT SNGGFLHTDP NAPLGPSVLP PWMANSGSST  180
AVRPPPPPSP SVTLTLSPLA VPPTPSIPWL QTSDRLADNA THGVMSHLPS PLVSELVECC  240
RELEEGHRSL AAHRKEAAWR LKRVELQLES EKASKRREKI EDIEAKVRAL REEEKFTLEG  300
IEADYREQLA GLRREAEVKE QKLAEQWAAK HVRLSKFLEQ MGCRSISAEP NGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-150	MYB family protein