PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02703.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HD-ZIP

Protein Properties

Length: 268aa MW: 30939.3 Da PI: 4.3276

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	66.4	3.7e-21	64	118	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t+eq++ Le+ Fe+++++ e++ +LAkklgL+ rqV vWFqNrRa++k+ PIN02703.1 64 KKRRLTPEQVQLLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKN 118 5678*************************************************95 PP
2	HD-ZIP_I/II	131.2	4.1e-42	63	154	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqv+lLE+sFeee+kLeperK++la++LglqprqvavWFqnrRAR+k+kqlE+dy++Lk++yd+l ++ +++ ke+++L++el PIN02703.1 63 EKKRRLTPEQVQLLEKSFEEENKLEPERKSQLAKKLGLQPRQVAVWFQNRRARWKNKQLERDYDQLKSSYDSLLSNYDSVLKENDKLKAELL 154 69**************************************************************************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MESARIFFDP TCHTNMLFLG NGDPGFRGAR SVMNMEESSK RRPFFSTPEE LYDEEYFDEQ 60 LPEKKRRLTP EQVQLLEKSF EEENKLEPER KSQLAKKLGL QPRQVAVWFQ NRRARWKNKQ 120 LERDYDQLKS SYDSLLSNYD SVLKENDKLK AELLTLTEKM QPKEPSEETD QKSEPLPTDA 180 PPCLQLTVKV EDRLSTGSDD SVVVDDDGRQ LLDSGDSYFP DNEYPDCVAA VDSIHSEVDD 240 GGDGRRSYFS DVFAAAEQQE PIVWCIWS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	120	RRARWKNKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	4e-71	HD-ZIP family protein