PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN02690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 172aa MW: 18975.1 Da PI: 4.671 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 30 | 6.5e-10 | 10 | 55 | 2 | 47 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47 ie+k +r++tf+kRr+g+ KK + dae+a++ +s+ g+ + PIN02690.1 10 LIEDKPKRHTTFTKRRKGLEKKTRVFCNKFDAEAAILTVSEAGNAF 55 59***************************************99865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MVRRRIEIEL IEDKPKRHTT FTKRRKGLEK KTRVFCNKFD AEAAILTVSE AGNAFGYGHP 60 SVDMVLDRYL DRAREENNGV EERLDGEVED EVEEAAAPLT EVEKRIADGM ESGKWEVAIG 120 DLGLEELGEL EAEMQKIKSN VAARAREIAA SEKNVSDGGS SSGNSSSGGF RS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01530.1 | 4e-15 | M-type_MADS family protein |