PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN02556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | bHLH | ||||||||
Protein Properties | Length: 190aa MW: 21891.1 Da PI: 7.1465 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 17.6 | 6.8e-06 | 41 | 83 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 e+Er+RR+++ ++ eL +l+ + ++Ka+i + A+ YI +L PIN02556.1 41 EAERKRRKKLSDRQLELCSLVLII-----TNMTKATIITDAITYIEEL 83 89********************96.....68**************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MDRVKTEFND LCITEGSKMD KRKNVDQNED EGRKFISKNL EAERKRRKKL SDRQLELCSL 60 VLIITNMTKA TIITDAITYI EELKKTVEEL TDQLRQIKTT CADEEKTNSE EEDIKKWGTM 120 PPEVQVNHIT GTKQWIKIVF QKKRGSLTNV TTSRGASLVT SSAEFAENFP CELPDADQIK 180 KFLLEIIKSF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 43 | 50 | ERKRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21330.1 | 1e-28 | bHLH family protein |