PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Previous version: v3.0 v4.0

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02220.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

NAC

Protein Properties

Length: 303aa MW: 35267.3 Da PI: 6.2886

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02220.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.8	2.2e-53	8	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPt+eelv +yLk+kv++ k++l +vi ++d+y++ePwd++ ++e++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+vls k PIN02220.1 8 VPPGFRFHPTEEELVGYYLKRKVNSLKIDL-NVIIDIDLYRIEPWDIEDrckLGYEEQTEWYFFSHKDRKYPTGTRTNRATAAGFWKATGRDKAVLS-K 104 69**************************.99**********842432233667**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g++ktLvfykgrap+g+ktdW+mheyrl PIN02220.1 105 DRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRL 136 899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MEIMESCVPP GFRFHPTEEE LVGYYLKRKV NSLKIDLNVI IDIDLYRIEP WDIEDRCKLG 60 YEEQTEWYFF SHKDRKYPTG TRTNRATAAG FWKATGRDKA VLSKDRIIGM RKTLVFYKGR 120 APNGRKTDWI MHEYRLQTSE HAPPQEEGWV VCRAFKKPSP SHQKQGFEAW NNPYGHFRSE 180 SSHYRPPYFP SHNFDLLINH GTNLNQSLNC SQSPFESQVL ELPNLDSPSI STSFTTNENN 240 IEDEKNNYGN QYSEWKCFDE LLQSQVIGAS SYARTNMALA PHNDDESDAR YHLSSVLECF 300 PDL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71930.1	1e-107	NAC family protein