PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN02124.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

HD-ZIP

Protein Properties

Length: 273aa MW: 31378.7 Da PI: 4.468

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN02124.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.1	5.2e-17	64	117	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q++ Le+ e ++++ e++ +LAk+l+L+ rq+ +WFqNrRa++k PIN02124.1 64 KKRRLSVDQVQLLERSLEADNKLEPERKIQLAKELNLQPRQIAIWFQNRRARWK 117 566899***********************************************9 PP
2	HD-ZIP_I/II	120.6	8.1e-39	63	153	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrls +qv+lLE+s e+++kLeperK +la+eL+lqprq+a+WFqnrRAR+kt+qlE+dyeaL+++y++lk++ ++L ke+e+L++e+ PIN02124.1 63 EKKRRLSVDQVQLLERSLEADNKLEPERKIQLAKELNLQPRQIAIWFQNRRARWKTRQLETDYEALHASYKSLKTDYDNLLKENEKLKAEV 153 69**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MGNQPLDYSM FAAAPSKSFL GQRTMLRFGA VSGANTLENS IFQSLDQEEN GDEYFDEYFN 60 QPEKKRRLSV DQVQLLERSL EADNKLEPER KIQLAKELNL QPRQIAIWFQ NRRARWKTRQ 120 LETDYEALHA SYKSLKTDYD NLLKENEKLK AEVLCLKHDG LSRSTEKAMQ NELFSRTISE 180 DEESKVSATA FKSEEQNDLT NVDSLLESGE SSNVVELEQS DLSQNGNNNL NKELLESDYI 240 FPKIEAAPCH APVSSFYDGF PSLEDHAFSF WSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	1e-39	HD-ZIP family protein