PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PIN01779.1

Organism

Handroanthus impetiginosus

Taxonomic ID

429701

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus

Family

C2H2

Protein Properties

Length: 264aa MW: 28362.8 Da PI: 8.2945

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PIN01779.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.2	0.00012	105	127	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+ksF++ L H +H PIN01779.1 105 YQCKTCNKSFPSFQALGGHRASH 127 9***********99999998887 PP
2	zf-C2H2	12.2	0.00056	177	199	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F + L H+r+H PIN01779.1 177 HECSICGAEFASGQALGGHMRRH 199 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MQLAQEELVL IKGKRSKRPR LALTVATSSS TTADSACGGG RGVVSDSDNS GSSNSFHELT 60 QSGKDNIGEE EDMANCLILL AKGAKSQAPP QEAAAAPNKA EGINYQCKTC NKSFPSFQAL 120 GGHRASHKKP IKAEEKKLLT DNITYKQENS TEESTILSLQ IQSGFSGSPQ NKTIRVHECS 180 ICGAEFASGQ ALGGHMRRHR PMPRIAPPPD GGGQQGKRQK NLLSLDLNLP APEDNDHRES 240 KFAFSSKEQV IVFSASSLVD CHIY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03510.1	1e-46	C2H2 family protein