PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PIN01532.1
Organism
Handroanthus impetiginosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
Family MYB
Protein Properties Length: 266aa    MW: 30290.1 Da    PI: 9.2982
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PIN01532.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.69.2e-161360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd++l d++ ++G  +Wk+ ++  g++R++k+c++rw +yl
       PIN01532.1 13 KGAWSEEEDKKLRDYILRYGHWNWKLLPKFAGLKRCGKSCRLRWMNYL 60
                     79******************99************************97 PP
2Myb_DNA-binding49.87.9e-1666111148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+ T++E+el+++++ +lG++ W++Ia++++ gRt++ +k++w+++l
       PIN01532.1  66 RGNYTKQEEELIAKLHDELGNK-WSAIAAKLP-GRTDNGIKNFWHTHL 111
                      899*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MRAPYIDKNG LKKGAWSEEE DKKLRDYILR YGHWNWKLLP KFAGLKRCGK SCRLRWMNYL  60
RPGIKRGNYT KQEEELIAKL HDELGNKWSA IAAKLPGRTD NGIKNFWHTH LKKRNKTNAA  120
NSTQNSPRIT YNCKNSQEAL AGADLNCKNS QEALASSDLN CKNSQEALAG ADLASEAQKF  180
SRKPTTFQVS AVHILESLGS SSWDSKDFKL LQDRINDERV STYADPFGGF QECFWTQPFL  240
LDTSYGQGDG SSWFDEWGFL SGYLLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.12e-58MYB family protein