PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIN00165.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 266aa MW: 30268.4 Da PI: 4.379 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.4 | 7.6e-21 | 64 | 117 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq + Le+ Fe+++++ +++++LA+klgL+ rqV vWFqNrRa++k PIN00165.1 64 KKRRLTPEQAHLLEKSFEEENKLEPDRKTQLAAKLGLQPRQVAVWFQNRRARWK 117 5678*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 132.5 | 1.5e-42 | 63 | 154 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eq++lLE+sFeee+kLep+rK++la +LglqprqvavWFqnrRAR+ktkqlE+dy++Lk++yd+l+++ +++ ke+++L++el PIN00165.1 63 EKKRRLTPEQAHLLEKSFEEENKLEPDRKTQLAAKLGLQPRQVAVWFQNRRARWKTKQLERDYDQLKSSYDSLAANYDSILKENDKLKAELL 154 69**************************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MESGRIFFDP SFNGNMSFLG KRDSVFRGAK TVMNMEETSK RRPFFTTVDE LYDEEYYDEQ 60 LPEKKRRLTP EQAHLLEKSF EEENKLEPDR KTQLAAKLGL QPRQVAVWFQ NRRARWKTKQ 120 LERDYDQLKS SYDSLAANYD SILKENDKLK AELLSLTEKL LPKEPAVEPA EYHKPSPQPV 180 GAPPTKVEDR LSTGSDGSAV VDDDSPQLLD SGDSYFPDDK YDHVCEAAVD GVNSEEDDGS 240 EGGGSYFSDV FAATEPQEPV GWFIWS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 120 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 3e-81 | HD-ZIP family protein |