PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PIM99128.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 172aa MW: 20551.9 Da PI: 4.4745 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.9 | 0.00016 | 137 | 153 | 1 | 17 |
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 ++C++C+k+F+r n++ PIM99128.1 137 FSCNICSKTFNRYNNMQ 153 89*********988765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 172 aa Download sequence |
MNFLKFPLFY QQQPEKDDED HHEYYYETIE CLPLLSRLTE KKEVKTEELE EEDDEENHEK 60 NMENVTVALH IGLPDIGSGM DNIIDENQQK SYNLNKVEEE EEYVKSKKTK KSSSNINGER 120 RFWIPTPAQI LVGPMQFSCN ICSKTFNRYN NMQVSDDQYF FFMLNIKWIY HA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G08290.1 | 1e-16 | C2H2 family protein |