PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PIM98002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Bignoniaceae; Crescentiina; Tabebuia alliance; Handroanthus
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Family | MYB | ||||||||
Protein Properties | Length: 247aa MW: 29191.8 Da PI: 9.6783 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.6 | 3.5e-19 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ll+++vk++G g+W+ ++r g++R +k+c++rw +yl PIM98002.1 21 KGPWTAEEDKLLIEYVKLHGEGRWNNVSRLAGLKRNGKSCRLRWVNYL 68 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.9 | 7.2e-16 | 74 | 118 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ ++++++++G++ W+tIar ++ gRt++++k++w+++ PIM98002.1 74 RGQITPHEERVILELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 118 7888******************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MSWGIMAQHM GWGAIEEGWR KGPWTAEEDK LLIEYVKLHG EGRWNNVSRL AGLKRNGKSC 60 RLRWVNYLRP DLKRGQITPH EERVILELHA RWGNRWSTIA RSLPGRTDNE IKNYWRTHFK 120 KKGKTSSESP EKAQARLLRR QQFQLQHQQQ QLRQQQLQQH QQDQIDNMRR ILALLDESDN 180 KVPTFTQLRQ EIAYPEEQGY GYSMINEYAT VPEGSNEDNI IWDGLWNLDD ITGRANYQHN 240 LATTTLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 1e-78 | MYB family protein |